Index of /data/cactus/605-vertebrate-2020-hub/Gallus_gallus

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]3prime-sampled-scale.wig2019-07-22 18:40 97K 
[ ]3prime-sampled.bed2019-07-22 18:40 2.2M 
[ ]3prime-sampled.wig2019-07-22 18:40 94K 
[ ]3prime-supersampled.bed2019-07-22 18:40 45K 
[ ]3prime.bed2019-07-22 18:40 145K 
[ ]3prime_mutex.bed2019-07-22 18:40 92K 
[ ]3prime_mutex_galGal6_mutex.bed2019-07-22 18:40 85K 
[ ]4d.max2019-07-22 18:40 9  
[ ]4d.mean2019-07-22 18:40 10  
[ ]4d.min2019-07-22 18:40 11  
[ ]4d.stddev2019-07-22 18:40 9  
[ ]4d_sampled.bedGraph2019-07-22 18:40 636K 
[ ]4d_sites.bed2019-08-08 14:10 53M 
[ ]4d_sites_mutex.bed2019-08-08 14:10 151M 
[ ]5prime-sampled-scale.wig2019-07-22 18:40 100K 
[ ]5prime-sampled.bed2019-07-22 18:40 2.2M 
[ ]5prime-sampled.wig2019-07-22 18:40 97K 
[ ]5prime-supersampled.bed2019-07-22 18:40 45K 
[ ]5prime.bed2019-07-22 18:40 138K 
[ ]5prime_mutex.bed2019-07-22 18:40 92K 
[ ]5prime_mutex_galGal6_mutex.bed2019-07-22 18:40 82K 
[ ]502019-07-22 18:40 0  
[ ]77way.max2019-07-22 18:40 9  
[ ]77way.mean2019-07-22 18:40 9  
[ ]77way.min2019-07-22 18:40 11  
[ ]77way.stddev2019-07-22 18:40 9  
[ ]77way_refit.genomewide.sampled.macros.bed.score_and_scale2019-07-22 18:40 443K 
[ ]77way_refit.genomewide.sampled.micros.bed.score_and_scale2019-07-22 18:40 132K 
[ ]77way_refit.genomewide.sampled.sex.bed.score_and_scale2019-07-22 18:40 53K 
[ ]77way_refit.sampled.score_and_scale2019-07-22 18:40 159K 
[ ]GSM2685803_chMM-Control_Rep1_H3K4me1_ChIP-seq.narrowPeak.bb2019-07-28 17:20 8.5M 
[ ]GSM2685804_chMM-Control_Rep2_H3K4me1_ChIP-seq.narrowPeak.bb2019-07-28 17:20 7.6M 
[ ]GSM2685805_chMM-Control_Rep1_H3K4me2_ChIP-seq.narrowPeak.bb2019-07-28 17:20 4.0M 
[ ]GSM2685806_chMM-Control_Rep2_H3K4me2_ChIP-seq.narrowPeak.bb2019-07-28 17:20 3.5M 
[ ]GSM2685807_chMM-Control_Rep1_H3K4me3_ChIP-seq.narrowPeak.bb2019-07-28 17:20 1.9M 
[ ]GSM2685808_chMM-Control_Rep2_H3K4me3_ChIP-seq.narrowPeak.bb2019-07-28 17:20 1.9M 
[ ]GSM2685809_chMM-Control_Rep1_H3K27ac_ChIP-seq.narrowPeak.bb2019-07-28 17:20 7.8M 
[ ]GSM2685810_chMM-Control_Rep2_H3K27ac_ChIP-seq.narrowPeak.bb2019-07-28 17:20 5.7M 
[ ]GSM2685811_chMM-Control_Rep1_H3K27me3_ChIP-seq.narrowPeak.bb2019-07-28 17:20 4.9M 
[ ]GSM2685812_chMM-Control_Rep2_H3K27me3_ChIP-seq.narrowPeak.bb2019-07-28 17:20 4.5M 
[ ]GSM2685814_chMM-OSR1_Rep1_OSR1-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 8.5M 
[ ]GSM2685816_chMM-OSR1_Rep2_OSR1-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 7.4M 
[ ]GSM2685818_chMM-OSR2_Rep1_OSR2-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 6.8M 
[ ]GSM2685820_chMM-OSR2_Rep2_OSR2-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 5.9M 
[ ]GSM2685822_chMM-EGR1_Rep1_EGR1-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 6.7M 
[ ]GSM2685824_chMM-EGR1_Rep2_EGR1-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 8.3M 
[ ]GSM2685826_chMM-KLF2_Rep1_KLF2-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 6.3M 
[ ]GSM2685828_chMM-KLF2_Rep2_KLF2-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 7.8M 
[ ]GSM2685830_chMM-KLF4_Rep1_KLF4-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 4.6M 
[ ]GSM2685832_chMM-KLF4_Rep2_KLF4-3F_ChIP-seq.narrowPeak.bb2019-07-28 17:20 5.9M 
[ ]Gallus_gallus.2bit2019-07-22 18:40 254M 
[ ]Gallus_gallus.genes.bb2019-07-24 22:03 2.1M 
[ ]NCBI-011.homolog.gff.coding.bed2019-07-22 18:40 3.2M 
[ ]NCBI-011.homolog.gff.coding.halCoverage.10002019-07-24 22:03 32K 
[ ]NCBI-011.homolog.gff.coding.halCoverage.20002019-07-26 08:37 59K 
[ ]NCBI-011.homolog.gff.coding.halCoverage.40002019-07-26 08:37 42K 
[ ]NCBI-011.homolog.gff.coding.maf_stream_coverage2019-07-22 18:40 0  
[ ]NCBI-011.homolog.gff.intron.bed2019-07-22 18:40 2.9M 
[ ]NCBI-011.homolog.gff.intron.halCoverage.10002019-07-24 22:03 21K 
[ ]NCBI-011.homolog.gff.intron.halCoverage.20002019-07-26 08:37 28K 
[ ]NCBI-011.homolog.gff.intron.halCoverage.40002019-07-26 08:37 41K 
[ ]NCBI-011.homolog.gff.intron.maf_stream_coverage2019-07-22 18:40 0  
[TXT]README.txt2019-07-22 18:40 10K 
[DIR]alignments/2020-10-18 22:23 -  
[ ]ancRep.max2019-07-22 18:40 9  
[ ]ancRep.mean2019-07-22 18:40 9  
[ ]ancRep.min2019-07-22 18:40 11  
[ ]ancRep.stddev2019-07-22 18:40 9  
[ ]ancRep_incmpl2019-07-22 18:40 2.8G 
[ ]ancRep_regions.3prime.bedGraph2019-07-22 18:40 12M 
[ ]ancRep_regions.3prime.sample2019-07-22 18:40 922K 
[ ]ancRep_regions.3prime.wig2019-07-22 18:40 140M 
[ ]ancRep_regions.5prime.bedGraph2019-07-22 18:41 12M 
[ ]ancRep_regions.5prime.sample2019-07-22 18:41 923K 
[ ]ancRep_regions.5prime.wig2019-07-22 18:41 137M 
[ ]ancRep_regions.ancestral_repeats.bedGraph2019-07-22 18:41 28K 
[ ]ancRep_regions.ancestral_repeats.sample2019-07-22 18:41 8.0K 
[ ]ancRep_regions.ancestral_repeats.scale.wig2019-07-22 18:42 3.5M 
[ ]ancRep_regions.ancestral_repeats.wig2019-07-22 18:42 3.3M 
[ ]ancRep_regions.coding_exons.bedGraph2019-07-22 18:41 1.4M 
[ ]ancRep_regions.coding_exons.sample2019-07-22 18:41 441K 
[ ]ancRep_regions.coding_exons.wig2019-07-22 18:41 39M 
[ ]ancRep_regions.exons.bw2019-07-22 18:42 12M 
[ ]ancRep_regions.exons.sample2019-07-22 18:42 908K 
[ ]ancRep_regions.exons.wig2019-07-22 18:42 1.6M 
[ ]ancRep_regions.introns.bedGraph2019-07-22 18:42 101M 
[ ]ancRep_regions.introns.sample2019-07-22 18:42 923K 
[ ]ancRep_regions.introns.wig2019-07-22 18:42 664M 
[ ]ancRep_regions.lncrna_exons.bedGraph2019-07-22 18:42 8.6M 
[ ]ancRep_regions.lncrna_exons.sample2019-07-22 18:42 919K 
[ ]ancRep_regions.noncode_lncrna_exons.bedGraph2019-07-22 18:43 4.7M 
[ ]ancRep_regions.noncode_lncrna_exons.sample2019-07-22 18:43 918K 
[ ]ancRep_regions.noncode_lncrna_exons.wig2019-07-22 18:43 34M 
[ ]ancRep_regions.utr_exons.bedGraph2019-07-22 18:43 3.8M 
[ ]ancRep_regions.utr_exons.sample2019-07-22 18:43 912K 
[ ]ancRep_regions.utr_exons.wig2019-07-22 18:43 24M 
[ ]ancRep_sampled.bedGraph2019-07-22 18:43 614K 
[ ]ancRep_sep.sampled.score_and_scale2019-07-22 18:43 153K 
[ ]ancRep_sep_regions.3prime.bedGraph2019-07-22 18:43 377M 
[ ]ancRep_sep_regions.3prime.sample2019-07-22 18:45 921K 
[ ]ancRep_sep_regions.4d_sites.bedGraph2019-08-08 14:10 116M 
[ ]ancRep_sep_regions.4d_sites.sample2019-08-08 14:10 927K 
[ ]ancRep_sep_regions.5prime.bedGraph2019-07-22 18:45 361M 
[ ]ancRep_sep_regions.5prime.sample2019-07-22 18:45 920K 
[ ]ancRep_sep_regions.ancestral_repeats.bedGraph2019-07-22 18:45 1.8M 
[ ]ancRep_sep_regions.ancestral_repeats.sample2019-07-22 18:45 522K 
[ ]ancRep_sep_regions.coding_exons.bedGraph2019-07-22 18:45 48M 
[ ]ancRep_sep_regions.coding_exons.sample2019-07-22 18:45 905K 
[ ]ancRep_sep_regions.introns.bedGraph2019-07-22 18:45 4.1G 
[ ]ancRep_sep_regions.introns.sample2019-07-22 18:45 920K 
[ ]ancRep_sep_regions.lncrna_exons.bedGraph2019-07-22 18:45 424M 
[ ]ancRep_sep_regions.lncrna_exons.sample2019-07-22 18:46 918K 
[ ]ancRep_sep_regions.non_4d_sites.bedGraph2019-08-08 14:10 193M 
[ ]ancRep_sep_regions.non_4d_sites.sample2019-08-08 14:10 902K 
[ ]ancRep_sep_regions.noncode_lncrna_exons.bedGraph2019-07-22 18:46 228M 
[ ]ancRep_sep_regions.noncode_lncrna_exons.sample2019-07-22 18:47 919K 
[ ]ancRep_sep_regions.utr_exons.bedGraph2019-07-22 18:47 124M 
[ ]ancRep_sep_regions.utr_exons.sample2019-07-22 18:47 911K 
[ ]ancRep_sep_scale_100002019-07-22 18:47 590K 
[ ]ancRep_separate_models_rev.bw2019-07-22 18:47 3.6G 
[ ]ancRep_separate_models_rev.bw.accelerated.bb2019-07-22 18:48 314M 
[ ]ancRep_separate_models_rev.bw.accelerated.bed2019-07-22 18:48 1.4G 
[ ]ancRep_separate_models_rev.bw.conserved.bb2019-07-22 18:49 329M 
[ ]ancRep_separate_models_rev.bw.conserved.bed2019-07-22 18:51 1.5G 
[ ]ancRep_separate_models_rev_sampled.bedGraph2019-07-22 18:52 919K 
[ ]ancestral_repeats.bed2019-07-22 18:53 1.5M 
[ ]ancestral_repeats_Gallus_gallus-sampled.bed2019-07-22 18:53 1.5M 
[ ]ancestral_repeats_Gallus_gallus-sampled.maf2019-07-22 18:53 719M 
[ ]ancestral_repeats_chicken-sampled.bed2019-07-22 18:54 1.6M 
[ ]ancestral_repeats_mutex.bed2019-07-22 18:54 1.3M 
[ ]ancestral_repeats_mutex_galGal6_mutex.bed2019-07-22 18:54 1.2M 
[ ]ancestral_repeats_root-sampled.bed2019-07-22 18:54 2.7M 
[ ]ancestral_repeats_root-sampled.maf2019-07-22 18:54 0  
[ ]ancestral_repeats_root-sampled.scale.wig2019-07-22 18:54 0  
[ ]ancestral_repeats_root-sampled.wig2019-07-22 18:54 0  
[ ]b10k_annotation.bed2019-08-08 14:10 2.3M 
[ ]b10k_exons.bed2019-08-08 14:11 2.0M 
[ ]browser_53way.sampled.score_and_scale2019-07-22 18:54 159K 
[ ]browser_55way.bw2019-07-22 18:54 3.5G 
[ ]browser_55way.galGal4.bedGraph2019-07-24 22:03 27G 
[ ]browser_55way.galGal4.bw2019-07-24 22:03 7.4G 
[ ]browser_55way.galGal4.bw.accelerated.bb2019-07-26 08:37 148M 
[ ]browser_55way.galGal4.bw.accelerated.bed2019-07-26 08:37 706M 
[ ]browser_55way.galGal4.bw.conserved.bb2019-07-26 08:37 91M 
[ ]browser_55way.galGal4.bw.conserved.bed2019-07-26 08:37 418M 
[ ]browser_55way.galGal4.sorted.bedGraph2019-07-24 22:03 27G 
[ ]browser_55way.wig2019-07-22 18:56 6.1G 
[ ]browser_55way_regions.3prime.bedGraph2019-07-22 18:57 366M 
[ ]browser_55way_regions.3prime.sample2019-07-22 18:59 926K 
[ ]browser_55way_regions.3prime_mutex_galGal6.bedGraph2019-07-22 18:59 363M 
[ ]browser_55way_regions.4d_sites.bedGraph2019-08-08 14:10 115M 
[ ]browser_55way_regions.4d_sites.sample2019-08-08 14:10 921K 
[ ]browser_55way_regions.5prime.bedGraph2019-07-22 19:02 354M 
[ ]browser_55way_regions.5prime.sample2019-07-22 19:05 928K 
[ ]browser_55way_regions.5prime_mutex_galGal6.bedGraph2019-07-22 19:04 349M 
[ ]browser_55way_regions.ancestral_repeats.bedGraph2019-07-22 19:06 1.7M 
[ ]browser_55way_regions.ancestral_repeats.sample2019-07-22 19:06 514K 
[ ]browser_55way_regions.ancestral_repeats_mutex_galGal6.bedGraph2019-07-22 19:06 1.7M 
[ ]browser_55way_regions.coding_exons.bedGraph2019-07-22 19:06 47M 
[ ]browser_55way_regions.coding_exons.sample2019-07-22 19:06 900K 
[ ]browser_55way_regions.coding_exons_mutex_galGal6.bedGraph2019-07-22 19:06 47M 
[ ]browser_55way_regions.introns.bedGraph2019-07-22 19:06 4.0G 
[ ]browser_55way_regions.introns.sample2019-07-22 19:06 923K 
[ ]browser_55way_regions.introns_mutex_galGal6.bedGraph2019-07-22 19:06 4.1G 
[ ]browser_55way_regions.lncrna_exons.bedGraph2019-07-22 19:06 409M 
[ ]browser_55way_regions.lncrna_exons.sample2019-07-22 19:09 922K 
[ ]browser_55way_regions.lncrna_exons_mutex_galGal6.bedGraph2019-07-22 19:09 427M 
[ ]browser_55way_regions.non_4d_sites.bedGraph2019-08-08 14:11 186M 
[ ]browser_55way_regions.non_4d_sites.sample2019-08-08 14:11 891K 
[ ]browser_55way_regions.noncode_lncrna_exons.bedGraph2019-07-22 19:11 221M 
[ ]browser_55way_regions.noncode_lncrna_exons.sample2019-07-22 19:12 922K 
[ ]browser_55way_regions.noncode_lncrna_exons_mutex_galGal6.bedGraph2019-07-22 19:12 229M 
[ ]browser_55way_regions.utr_exons.bedGraph2019-07-22 19:13 119M 
[ ]browser_55way_regions.utr_exons.sample2019-07-22 19:13 912K 
[ ]browser_55way_regions.utr_exons_mutex_galGal6.bedGraph2019-07-22 19:13 120M 
[ ]browser_55way_sampled.bedGraph2019-07-22 19:13 923K 
[ ]browser_77way_refit.bw2019-07-22 19:13 3.7G 
[ ]browser_77way_refit.conserved.bed2019-07-26 08:37 39M 
[ ]browser_77way_refit.galGal4.bedGraph2019-07-24 22:04 27G 
[ ]browser_77way_refit.galGal4.bw2019-07-24 22:04 7.6G 
[ ]browser_77way_refit.galGal4.bw.accelerated.bb2019-07-26 08:37 156M 
[ ]browser_77way_refit.galGal4.bw.accelerated.bed2019-07-26 08:37 753M 
[ ]browser_77way_refit.galGal4.bw.conserved.bb2019-07-26 08:37 139M 
[ ]browser_77way_refit.galGal4.bw.conserved.bed2019-07-26 08:37 542M 
[ ]browser_77way_refit.galGal4.sorted.bedGraph2019-07-24 22:20 27G 
[ ]browser_77way_refit.wig2019-07-22 19:14 6.2G 
[ ]browser_77way_refit_regions.3prime.bedGraph2019-07-22 19:24 371M 
[ ]browser_77way_refit_regions.3prime.sample2019-07-22 19:25 926K 
[ ]browser_77way_refit_regions.3prime_mutex_galGal6.bedGraph2019-07-22 19:25 367M 
[ ]browser_77way_refit_regions.4d_sites.bedGraph2019-08-08 14:11 116M 
[ ]browser_77way_refit_regions.4d_sites.sample2019-08-08 14:11 937K 
[ ]browser_77way_refit_regions.5prime.bedGraph2019-07-22 19:26 358M 
[ ]browser_77way_refit_regions.5prime.sample2019-07-22 19:26 929K 
[ ]browser_77way_refit_regions.5prime_mutex_galGal6.bedGraph2019-07-22 19:26 352M 
[ ]browser_77way_refit_regions.ancestral_repeats.bedGraph2019-07-22 19:26 1.7M 
[ ]browser_77way_refit_regions.ancestral_repeats.sample2019-07-22 19:26 515K 
[ ]browser_77way_refit_regions.ancestral_repeats_mutex_galGal6.bedGraph2019-07-22 19:26 1.7M 
[ ]browser_77way_refit_regions.coding_exons.bedGraph2019-07-22 19:26 48M 
[ ]browser_77way_refit_regions.coding_exons.sample2019-07-22 19:27 901K 
[ ]browser_77way_refit_regions.coding_exons_mutex_galGal6.bedGraph2019-07-22 19:27 49M 
[ ]browser_77way_refit_regions.introns.bedGraph2019-07-22 19:27 4.1G 
[ ]browser_77way_refit_regions.introns.sample2019-07-22 19:27 924K 
[ ]browser_77way_refit_regions.introns_mutex_galGal6.bedGraph2019-07-22 19:27 4.1G 
[ ]browser_77way_refit_regions.lncrna_exons.bedGraph2019-07-22 19:28 414M 
[ ]browser_77way_refit_regions.lncrna_exons.sample2019-07-22 19:30 924K 
[ ]browser_77way_refit_regions.lncrna_exons_mutex_galGal6.bedGraph2019-07-22 19:30 432M 
[ ]browser_77way_refit_regions.non_4d_sites.bedGraph2019-08-08 14:11 196M 
[ ]browser_77way_refit_regions.non_4d_sites.sample2019-08-08 14:11 892K 
[ ]browser_77way_refit_regions.noncode_lncrna_exons.bedGraph2019-07-22 19:30 223M 
[ ]browser_77way_refit_regions.noncode_lncrna_exons.sample2019-07-22 19:31 923K 
[ ]browser_77way_refit_regions.noncode_lncrna_exons_mutex_galGal6.bedGraph2019-07-22 19:31 232M 
[ ]browser_77way_refit_regions.utr_exons.bedGraph2019-07-22 19:31 120M 
[ ]browser_77way_refit_regions.utr_exons.sample2019-07-22 19:31 914K 
[ ]browser_77way_refit_regions.utr_exons_mutex_galGal6.bedGraph2019-07-22 19:31 124M 
[ ]browser_77way_refit_sampled.bedGraph2019-07-22 19:32 924K 
[ ]browser_and_ancRep.bedGraph2019-07-22 19:32 785M 
[ ]browser_and_ancRep_sampled.bedGraph2019-07-22 19:32 19M 
[ ]browser_full2019-07-22 19:32 5.8G 
[ ]browser_minus_4d.max2019-07-22 19:33 10  
[ ]browser_minus_4d.mean2019-07-22 19:33 9  
[ ]browser_minus_4d.min2019-07-22 19:33 11  
[ ]browser_minus_4d.stddev2019-07-22 19:33 9  
[ ]browser_minus_4d.wig2019-07-22 19:33 175M 
[ ]browser_minus_ancRep.max2019-07-22 19:33 10  
[ ]browser_minus_ancRep.mean2019-07-22 19:33 10  
[ ]browser_minus_ancRep.min2019-07-22 19:33 11  
[ ]browser_minus_ancRep.stddev2019-07-22 19:33 9  
[ ]browser_minus_ancRep.wig2019-07-22 19:33 180M 
[ ]browser_regions.3prime.bedGraph2019-07-22 19:34 382M 
[ ]browser_regions.3prime.sample2019-07-22 19:34 926K 
[ ]browser_regions.3prime.wig2019-07-22 19:34 9.3M 
[ ]browser_regions.5prime.bedGraph2019-07-22 19:34 365M 
[ ]browser_regions.5prime.sample2019-07-22 19:35 927K 
[ ]browser_regions.5prime.wig2019-07-22 19:35 9.0M 
[ ]browser_regions.ancestral_repeats.bedGraph2019-07-22 19:35 1.7M 
[ ]browser_regions.ancestral_repeats.sample2019-07-22 19:35 515K 
[ ]browser_regions.ancestral_repeats.wig2019-07-22 19:35 3.5M 
[ ]browser_regions.coding_exons.bedGraph2019-07-22 19:35 49M 
[ ]browser_regions.coding_exons.sample2019-07-22 19:35 896K 
[ ]browser_regions.coding_exons.wig2019-07-22 19:35 2.6M 
[ ]browser_regions.exons.sample2019-07-22 19:35 908K 
[ ]browser_regions.exons.wig2019-07-22 19:35 53M 
[ ]browser_regions.introns.bedGraph2019-07-22 19:35 4.2G 
[ ]browser_regions.introns.sample2019-07-22 19:35 923K 
[ ]browser_regions.introns.wig2019-07-22 19:35 34M 
[ ]browser_regions.lncrna_exons.bedGraph2019-07-22 19:35 434M 
[ ]browser_regions.lncrna_exons.sample2019-07-22 19:36 923K 
[ ]browser_regions.noncode_lncrna_exons.bedGraph2019-07-22 19:36 232M 
[ ]browser_regions.noncode_lncrna_exons.sample2019-07-22 19:36 922K 
[ ]browser_regions.noncode_lncrna_exons.wig2019-07-22 19:36 1.4M 
[ ]browser_regions.utr_exons.bedGraph2019-07-22 19:36 124M 
[ ]browser_regions.utr_exons.sample2019-07-22 19:36 913K 
[ ]browser_regions.utr_exons.wig2019-07-22 19:36 1.6M 
[ ]browser_sampled.bedGraph2019-07-22 19:36 617K 
[ ]chicken.bigMaf.bb2019-07-22 19:36 182G 
[ ]chicken_coding_exons_ancestral_comp2019-07-22 19:37 187  
[ ]chicken_fullGenome_ancestral_comp2019-07-22 19:37 208  
[ ]chicken_introns_ancestral_comp2019-07-22 19:37 207  
[ ]chicken_lncrna_exons_ancestral_comp2019-07-22 19:37 188  
[ ]chicken_utr_exons_ancestral_comp2019-07-22 19:37 187  
[ ]chr10.chrom.sizes2019-07-22 19:37 15  
[ ]chr10.wig2019-07-22 19:37 2.4M 
[ ]chr10_random.scale.sample2019-07-22 19:37 852K 
[ ]chr10_random.scale.wig2019-07-22 19:37 2.5M 
[ ]chr10_sampled.bed2019-07-22 19:37 1.1M 
[ ]chr10_sampled.maf2019-07-22 19:37 1.6G 
[ ]chr10_sampled_sample2019-07-22 19:37 77K 
[ ]chrom.sizes2019-07-22 19:37 379K 
[ ]coding_exons-sampled-scale.wig2019-07-22 19:37 100K 
[ ]coding_exons-sampled.bed2019-07-22 19:37 2.2M 
[ ]coding_exons-sampled.wig2019-07-22 19:37 97K 
[ ]coding_exons-supersampled.bed2019-07-22 19:37 45K 
[ ]coding_exons.bed2019-07-22 19:37 1.3M 
[ ]coding_exons.bed.halCoverage2019-07-24 22:21 16K 
[ ]coding_exons.halCoverage.10002019-07-24 22:21 37K 
[ ]coding_exons.halCoverage.20002019-07-26 08:38 40K 
[ ]coding_exons.halCoverage.40002019-07-26 08:38 39K 
[ ]coding_exons.maf_stream_coverage2019-07-22 19:37 0  
[DIR]coding_exons_beds/2020-10-18 22:58 -  
[ ]coding_exons_mutex.bed2019-07-22 19:38 179K 
[ ]coding_exons_mutex_galGal6_mutex.bed2019-07-22 19:38 172K 
[ ]coding_exons_root.bed2019-07-22 19:38 1.9M 
[ ]coding_regions.bed2019-07-22 19:39 136K 
[ ]comparison_sample.galGal4.bed2019-07-22 19:39 31M 
[ ]comparison_sample.galGal4.bedGraph2019-07-22 19:39 29M 
[ ]comparison_sample.galGal4.bw2019-07-22 19:39 12M 
[ ]comparison_sample.galGal6.bed2019-07-22 19:39 32M 
[ ]comparison_sample.galGal6.bedGraph2019-07-22 19:39 30M 
[ ]conserved_phylop_ancRep_chr10.bed2019-07-22 19:39 36M 
[ ]conserved_phylop_ancRep_chr10.lengths.combined2019-07-22 19:39 51M 
[ ]conserved_phylop_ancRep_chr10.spacing2019-07-22 19:39 3.5M 
[ ]conserved_phylop_browser_chr10.bed2019-07-22 19:39 20M 
[ ]conserved_phylop_browser_chr10.lengths.combined2019-07-22 19:39 40M 
[ ]conserved_phylop_browser_chr10.spacing2019-07-22 19:39 2.0M 
[ ]conserved_site_contexts.fa2019-07-22 19:39 294K 
[ ]conserved_site_contexts.pdf2019-07-22 19:39 5.3K 
[TXT]description.html2019-07-27 23:22 258  
[ ]ensembl.galGal6.bigGenePred2022-02-06 13:51 8.6M 
[ ]exons-sampled-scale.wig2019-07-22 19:39 100K 
[ ]exons-sampled.bed2019-07-22 19:39 2.2M 
[ ]exons-sampled.wig2019-07-22 19:39 97K 
[ ]exons-supersampled.bed2019-07-22 19:39 45K 
[ ]exons.bed2019-07-22 19:39 1.4M 
[ ]foo.bed2019-07-22 19:39 1.6M 
[ ]foo.bg2019-07-22 19:39 86M 
[ ]foo.bw2019-07-22 19:39 23M 
[ ]foo.maf2019-07-22 19:39 668M 
[ ]foo.wig2019-07-22 19:39 78M 
[ ]fullGenome.bed2019-07-22 19:39 410K 
[ ]fullGenome_root.bed2019-07-22 19:39 626M 
[ ]galGal4.phastCons77way.fromGalGal6.bedGraph2019-07-22 19:41 14G 
[ ]galGal4.phyloP.chr10.fromGalGal6.bedGraph2019-07-22 19:41 545M 
[ ]galGal4.phyloP.chr10.fromGalGal6.bw2019-07-22 19:41 155M 
[ ]galGal4.phyloP.chr10.fromGalGal6.uniq.bedGraph2019-07-22 19:42 543M 
[ ]galGal4.phyloP.fromGalGal6.bw2019-07-22 19:42 7.6G 
[ ]galGal4_phastConsElements_fromGalGal4.bed2019-07-22 19:42 240M 
[ ]galGal4_phastConsElements_fromGalGal4.bw2019-07-22 19:42 82M 
[ ]galGal4_refSeq.bb2019-07-22 19:43 798K 
[ ]galGal4_refSeq.bed2019-07-22 19:43 1.0M 
[ ]galGal4_refSeq.sorted.bed2019-07-22 19:43 1.0M 
[ ]galGal4_refSeq_4d.bed2019-08-08 14:11 10M 
[ ]galGal4_refSeq_5prime.bed2019-07-22 19:43 283K 
[ ]galGal4_refSeq_exons.bed2019-07-22 19:43 0  
[ ]galGal4_refSeq_introns.bed2019-07-22 19:43 929K 
[ ]galGal6.77way.commonNames.nh2019-07-22 19:43 3.4K 
[ ]galGal6.77way.nh2019-07-22 19:43 3.0K 
[ ]galGal6.77way.scientificNames.nh2019-07-22 19:43 3.7K 
[ ]galGal6.chrom.sizes2019-07-22 19:43 12K 
[ ]galGal6.genomewide.sampled.bed2019-07-22 19:43 322K 
[ ]galGal6.genomewide.sampled.macros.bed2019-07-22 19:43 219K 
[ ]galGal6.genomewide.sampled.macros.bed.fixed.fixed.fixed.fixed.maf2019-07-22 19:43 9.2M 
[ ]galGal6.genomewide.sampled.macros.bed.fixed.fixed.fixed.maf2019-07-22 19:43 9.1M 
[ ]galGal6.genomewide.sampled.macros.bed.fixed.fixed.maf2019-07-22 19:43 9.1M 
[ ]galGal6.genomewide.sampled.macros.bed.fixed.maf2019-07-22 19:43 9.3M 
[ ]galGal6.genomewide.sampled.macros.bed.maf2019-07-22 19:43 7.3M 
[ ]galGal6.genomewide.sampled.macros.bed.score_and_scale2019-07-22 19:43 443K 
[ ]galGal6.genomewide.sampled.maf2019-07-22 19:43 472M 
[ ]galGal6.genomewide.sampled.micros.bed2019-07-22 19:43 67K 
[ ]galGal6.genomewide.sampled.micros.bed.fixed.fixed.fixed.fixed.maf2019-07-22 19:43 2.7M 
[ ]galGal6.genomewide.sampled.micros.bed.fixed.fixed.fixed.maf2019-07-22 19:43 2.7M 
[ ]galGal6.genomewide.sampled.micros.bed.fixed.fixed.maf2019-07-22 19:43 2.7M 
[ ]galGal6.genomewide.sampled.micros.bed.fixed.maf2019-07-22 19:43 2.7M 
[ ]galGal6.genomewide.sampled.micros.bed.maf2019-07-22 19:43 2.1M 
[ ]galGal6.genomewide.sampled.micros.bed.score_and_scale2019-07-22 19:43 132K 
[ ]galGal6.genomewide.sampled.multi_wig2019-07-22 19:43 1.2M 
[ ]galGal6.genomewide.sampled.scale.wig2019-07-22 19:43 891K 
[ ]galGal6.genomewide.sampled.score_and_scale2019-07-22 19:43 180K 
[ ]galGal6.genomewide.sampled.sex.bed2019-07-22 19:43 28K 
[ ]galGal6.genomewide.sampled.sex.bed.fixed.fixed.fixed.fixed.maf2019-07-22 19:43 874K 
[ ]galGal6.genomewide.sampled.sex.bed.fixed.fixed.fixed.maf2019-07-22 19:43 864K 
[ ]galGal6.genomewide.sampled.sex.bed.fixed.fixed.maf2019-07-22 19:43 864K 
[ ]galGal6.genomewide.sampled.sex.bed.fixed.maf2019-07-22 19:43 885K 
[ ]galGal6.genomewide.sampled.sex.bed.maf2019-07-22 19:43 691K 
[ ]galGal6.genomewide.sampled.sex.bed.score_and_scale2019-07-22 19:43 53K 
[ ]galGal6.genomewide.sampled.wig2019-07-22 19:43 863K 
[ ]galGal6.phastCons77way.bedGraph2019-07-22 19:43 15G 
[ ]galGal6.phastCons77way.bw2019-07-22 19:44 1.8G 
[ ]galGal6.phyloP77way.bw2019-07-22 19:47 3.7G 
[ ]galGal6.phyloP77way.chr10.bedGraph2019-07-22 19:53 555M 
[ ]galGal6.phyloP77way.mod2019-07-22 19:54 2.5K 
[ ]galGal6ToGalGal4.over.chain.gz2019-07-22 19:54 1.4M 
[ ]galGal6_phastConsElements.bed2019-07-22 19:54 241M 
[TXT]get_beds.sh2019-07-22 19:54 521  
[ ]gt2019-07-22 19:54 0  
[DIR]homology_exons_beds/2020-10-18 23:07 -  
[DIR]homology_introns_beds/2020-10-18 23:08 -  
[ ]introns-sampled-scale.wig2019-07-22 19:55 100K 
[ ]introns-sampled.bed2019-07-22 19:55 2.2M 
[ ]introns-sampled.wig2019-07-22 19:55 97K 
[ ]introns-supersampled.bed2019-07-22 19:55 45K 
[ ]introns.bed2019-07-22 19:55 130K 
[ ]introns.halCoverage.10002019-07-24 22:23 43K 
[ ]introns.halCoverage.20002019-07-26 08:38 25K 
[ ]introns.halCoverage.40002019-07-26 08:38 39K 
[ ]introns.maf_stream_coverage2019-07-22 19:56 0  
[DIR]introns_beds/2020-10-18 23:08 -  
[ ]introns_mutex.bed2019-07-22 19:56 1.3M 
[ ]introns_mutex_galGal6_mutex.bed2019-07-22 19:56 1.3M 
[ ]introns_root.bed2019-07-22 19:56 103M 
[ ]linker_coding_exons_root2019-07-22 19:56 2.3M 
[ ]linker_fullGenome_root2019-07-22 19:56 190M 
[ ]linker_introns_root2019-07-22 19:57 35M 
[ ]linker_lncrna_exons_root2019-07-22 19:57 6.0M 
[ ]linker_utr_exons_root2019-07-22 19:57 2.7M 
[ ]lncrna.bed2019-07-22 19:57 1.9M 
[ ]lncrna_exons.bed2019-07-22 19:57 2.6M 
[ ]lncrna_exons_mutex.bed2019-07-22 19:57 2.1M 
[ ]lncrna_exons_mutex_galGal6_mutex.bed2019-07-22 19:57 2.0M 
[ ]lncrna_exons_root.bed2019-07-22 19:57 22M 
[ ]macros.bed2019-07-22 19:57 385K 
[ ]micros.bed2019-07-22 19:57 24K 
[ ]no_col_likelihood_hijinx.sampled.bedGraph2019-07-22 19:57 62K 
[ ]no_col_likelihood_hijinx_eps1e-7.sampled.bedGraph2019-07-22 19:57 62K 
[ ]no_col_likelihood_hijinx_eps1e-7_sigfigs.sampled.bedGraph2019-07-22 19:57 0  
[ ]non_4d_sites_mutex.bed2019-08-08 14:11 48M 
[ ]noncode_lncrna_exons.bed2019-07-22 19:57 617K 
[ ]noncode_lncrna_exons.halCoverage.10002019-07-24 22:23 26K 
[ ]noncode_lncrna_exons.halCoverage.20002019-07-26 08:38 27K 
[ ]noncode_lncrna_exons.halCoverage.40002019-07-26 08:38 36K 
[ ]noncode_lncrna_exons.maf_stream_coverage2019-07-22 19:57 0  
[DIR]noncode_lncrna_exons_beds/2020-10-18 23:09 -  
[ ]noncode_lncrna_exons_mutex.bed2019-07-22 19:57 581K 
[ ]noncode_lncrna_exons_mutex_galGal6_mutex.bed2019-07-22 19:57 572K 
[ ]noncoding_transcribed.bed2019-08-08 14:11 907K 
[ ]noncoding_transcribed_mutex.bed2019-08-08 14:11 774K 
[ ]overall.maf_stream_coverage2019-07-22 19:57 0  
[ ]phylop_4d.bw2019-07-22 19:57 73M 
[ ]phylop_ancRep.bw2019-07-22 19:57 73M 
[ ]phylop_ancRep_incmpl.bw2019-07-22 19:58 1.7G 
[ ]phylop_ancRep_incmpl.wig2019-07-22 19:58 3.1G 
[ ]phylop_ancRep_significant_accelerated_incmpl.bb2019-07-22 20:01 1.0G 
[ ]phylop_ancRep_significant_accelerated_incmpl.bed2019-07-22 20:04 3.9G 
[ ]phylop_ancRep_significant_conserved_incmpl.bb2019-07-22 20:07 213M 
[ ]phylop_ancRep_significant_conserved_incmpl.bed2019-07-22 20:08 863M 
[ ]phylop_incml_ancRep.bw2019-07-22 20:12 53M 
[ ]resample_ancRep2019-07-22 20:12 603K 
[ ]resample_browser2019-07-22 20:12 616K 
[ ]sampled.bed2019-07-22 20:12 313K 
[ ]sampled.scale.wig2019-07-22 20:12 502K 
[ ]sampled.score_and_scale2019-07-22 20:12 180K 
[ ]sampled.wig2019-07-22 20:12 488K 
[ ]sex.bed2019-07-22 20:12 1.4K 
[TXT]summarize_wig.sh2019-07-22 20:12 307  
[ ]test_no_col_likelihood_hijinx2019-07-22 20:12 470K 
[ ]test_no_col_likelihood_hijinx.alt_lnl2019-07-22 20:12 499K 
[ ]test_no_col_likelihood_hijinx.lnl2019-07-22 20:12 510K 
[ ]test_no_col_likelihood_hijinx.scale2019-07-22 20:12 494K 
[ ]test_no_col_likelihood_hijinx_eps1e-72019-07-22 20:12 424K 
[ ]test_no_col_likelihood_hijinx_eps1e-7.alt_lnl2019-07-22 20:12 444K 
[ ]test_no_col_likelihood_hijinx_eps1e-7.lnl2019-07-22 20:12 455K 
[ ]test_no_col_likelihood_hijinx_eps1e-7.scale2019-07-22 20:12 440K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs2019-07-22 20:12 424K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.alt_lnl2019-07-22 20:12 444K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.alt_lnl.bw2019-07-22 20:12 444K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.bw2019-07-22 20:12 424K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.lnl2019-07-22 20:12 455K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.lnl.bw2019-07-22 20:12 455K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.scale2019-07-22 20:12 441K 
[ ]test_no_col_likelihood_hijinx_eps1e-7_sigfigs.scale.bw2019-07-22 20:12 441K 
[TXT]trackDb.txt2020-11-13 12:03 129K 
[ ]upstream1000.ncbiRefSeq.maf.gz2019-07-22 20:12 582M 
[ ]upstream2000.ncbiRefSeq.maf.gz2019-07-22 20:15 1.2G 
[ ]upstream5000.ncbiRefSeq.maf.gz2019-07-22 20:18 3.2G 
[ ]utr_exons.bed2019-07-22 20:19 302K 
[ ]utr_exons.bed.halCoverage2019-07-24 22:24 18K 
[ ]utr_exons.halCoverage.10002019-07-24 22:24 26K 
[ ]utr_exons.halCoverage.20002019-07-26 08:38 37K 
[ ]utr_exons.halCoverage.40002019-07-26 08:38 29K 
[ ]utr_exons.maf_stream_coverage2019-07-22 20:19 0  
[DIR]utr_exons_beds/2020-10-18 23:14 -  
[ ]utr_exons_mutex.bed2019-07-22 20:21 200K 
[ ]utr_exons_mutex_galGal6_mutex.bed2019-07-22 20:21 194K 
[ ]utr_exons_root.bed2019-07-22 20:21 3.9M 
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